Latest Publications

@article{nekvindova_hepatocellular_2020,

title = {Hepatocellular carcinoma: Gene expression profiling and regulation of xenobiotic-metabolizing cytochromes P450.},

author = {Jana Nekvindova and Alena Mrkvicova and Veronika Zubanova and Alena Hyrslova Vaculova and Pavel Anzenbacher and Pavel Soucek and Lenka Radova and Ondrej Slaby and Igor Kiss and Jan Vondracek and Alena Spicakova and Lucia Bohovicova and Pavel Fabian and Zdenek Kala and Vladimir Palicka},

doi = {10.1016/j.bcp.2020.113912},

issn = {1873-2968 0006-2952},

year  = {2020},

date = {2020-07-01},

journal = {Biochemical pharmacology},

volume = {177},

pages = {113912},

abstract = {Hepatocellular carcinoma (HCC) remains a highly prevalent and deadly disease, being among the top causes of cancer-related deaths worldwide. Despite the fact that the liver is the major site of biotransformation, studies on drug metabolizing enzymes in HCC are scarce. It is known that malignant transformation of hepatocytes leads to a significant alteration of their metabolic functions and overall deregulation of gene expression. Advanced stages of the disease are thus frequently associated with liver failure, and severe alteration of drug metabolism. However, the impact of dysregulation of metabolic enzymes on therapeutic efficacy and toxicity in HCC patients is largely unknown. Here we demonstrate a significant down-regulation in European Caucasian patients of cytochromes P450 (CYPs), the major xenobiotic-metabolizing enzymes, in HCC tumour samples as compared to their surrounding non-cancerous (reference) tissue. Moreover, we report for the first time the association of the unique CYP profiles with specific transcriptome changes, and interesting correlations with expression levels of nuclear receptors and with the histological grade of the tumours. Integrated analysis has suggested certain co-expression profiles of CYPs with lncRNAs that need to be further characterized. Patients with large tumours with down-regulated CYPs could be more vulnerable to drug toxicity; on the other hand, such tumours would eliminate drugs more slowly and should be more sensitive to pharmacotherapy (except in the case of pro-drugs where activation is necessary).},

note = {Place: England},

keywords = {*Gene Expression Regulation, *Transcriptome, Adult, Aged, Carcinoma, Cohort Studies, CYP, Cytochrome P-450 Enzyme System/*genetics, Cytochrome P450, Cytoplasmic and Nuclear/genetics/metabolism, Drug metabolism, Enzymologic, Female, Gene Expression, Gene Expression Profiling, Hepatocellular carcinoma, Hepatocellular/*enzymology/pathology, Hepatocytes/metabolism, Humans, Inactivation, Liver Neoplasms/*enzymology/pathology, Liver/metabolism, Male, Metabolic/genetics, Middle Aged, Neoplasm Grading, Non-coding RNA, Receptors},

pubstate = {published},

tppubtype = {article}

}

@article{prochazkova_differential_2011,

title = {Differential effects of indirubin and 2,3,7,8-tetrachlorodibenzo-p-dioxin on the aryl hydrocarbon receptor (AhR) signalling in liver progenitor cells.},

author = {Jiřina Procházková and Alois Kozubík and Miroslav Machala and Jan Vondráček},

doi = {10.1016/j.tox.2010.10.003},

issn = {1879-3185 0300-483X},

year  = {2011},

date = {2011-01-01},

journal = {Toxicology},

volume = {279},

number = {1-3},

pages = {146–154},

abstract = {In the present study, we investigated the effects of potential endogenous ligand indirubin on the aryl hydrocarbon receptor (AhR) signalling, with a focus on the AhR-dependent gene expression and cell cycle progression in rat liver progenitor cells, and compared them with the effects of a model toxic AhR ligand, 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD). The low (picomolar and nanomolar) doses of indirubin, corresponding to expected endogenous levels, induced a transient translocation of AhR to the nucleus, while high (micromolar) doses induced a long-term AhR nuclear translocation, followed by its degradation, similar to the effects of TCDD. Whereas high doses of indirubin recruited AhR/ARNT1 dimer to rat Cyp1a1 promoter, the low doses did not induce its DNA binding, as revealed by the chromatin immunoprecipitation assay. This corresponded with the fact that the micromolar doses of indirubin significantly increased Cyp1a1/1b1 mRNA in a way similar to TCDD, while the low doses of indirubin were only poor inducers of Cyp1a1/1b1 expression. Comparable patterns of expression were observed also for other AhR gene targets, such as Nqo1 and Nrf2. Also, only micromolar doses of indirubin were able to mimic the effects of TCDD on cell cycle and proliferation of liver progenitor cells or hepatoma cells. Nevertheless, indirubin at low concentrations may have unique effects on gene expression in non-tumorigenic cells. Although both TCDD and the high doses of indirubin repressed plakoglobin (Jup) expression, the picomolar doses of indirubin, unlike the equimolar doses of TCDD, increased mRNA levels of this important desmosomal and adherens junctions constituent. These present data suggest that the outcome of AhR activation induced by indirubin at concentrations expected in vivo may differ from the AhR signalling triggered by exogenous toxic ligands, such as TCDD.},

note = {Place: Ireland},

keywords = {Animals, Aryl Hydrocarbon/*drug effects/metabolism, Carcinoma, Cell Cycle/drug effects, Cell Nucleus/metabolism, Cell Proliferation/drug effects, Cells, Chromatin Immunoprecipitation, Cultured, Dose-Response Relationship, Drug, Gene Expression Regulation/*drug effects, Hepatocellular/pathology, Indoles/administration & dosage/metabolism/pharmacology, Liver Neoplasms/pathology, Liver/cytology/drug effects/metabolism, Polychlorinated Dibenzodioxins/*toxicity, Protein Transport, Rats, Receptors, Signal Transduction/drug effects, Stem Cells/drug effects/metabolism},

pubstate = {published},

tppubtype = {article}

}

@article{marvanova_toxic_2008,

title = {Toxic effects of methylated benz[a]anthracenes in liver cells.},

author = {Sona Marvanová and Jan Vondrácek and Katerrina Penccíková and Lenka Trilecová and Pavel Krcmárr and Jan Topinka and Zuzana Nováková and Alena Milcová and Miroslav Machala},

doi = {10.1021/tx700305x},

issn = {0893-228X},

year  = {2008},

date = {2008-02-01},

journal = {Chemical research in toxicology},

volume = {21},

number = {2},

pages = {503–512},

abstract = {Monomethylated benz[ a]anthracenes (MeBaAs) are an important group of methylated derivatives of polycyclic aromatic hydrocarbons (PAHs). Although the methyl substitution reportedly affects their mutagenicity and tumor-initiating activity, little is known about the impact of methylation on the effects associated with activation of the aryl hydrocarbon receptor (AhR)-dependent gene expression and/or toxic events associated with tumor promotion. In the present study, we studied the effects of a series of MeBaAs on the above-mentioned end points in rat liver cell lines and compared them with the effects of benz[ a]anthracene (BaA) and the potent carcinogen 7,12-dimethylbenz[ a]anthracene (DMBA). Methyl substitution enhanced the AhR-mediated activity of BaA derivatives determined in a reporter gene assay, as the induction equivalency factors (IEFs) of all MeBaAs were higher than that of BaA. IEFs of 6-MeBaA and 9-MeBaA, two of the most potent MeBaAs, were more than two orders of magnitude higher than the IEF of BaA. Correspondingly, all MeBaAs induced higher levels of cytochrome P450 1A1 mRNA. Both BaA and MeBaAs had similar effects on the expression of cytochrome P450 1B1 or aldo-keto reductase 1C9 in rat liver epithelial WB-F344 cells. In contrast to genotoxic DMBA, MeBaAs induced low DNA adduct formation. Only 10-MeBaA induced apoptosis and accumulation of phosphorylated p53, which could be associated with the induction of oxidative stress, similar to DMBA. With the exception of 10-MeBaA, all MeBaAs induced cell proliferation in contact-inhibited WB-F344 cells, which corresponded with their ability to activate AhR. 1-, 2-, 8-, 10-, 11-, and 12-MeBaA inhibited gap junctional intercellular communication (GJIC) in WB-F344 cells. This mode of action, like disruption of cell proliferation control, might contribute to tumor promotion. Taken together, these data showed that the methyl substitution significantly influences those effects of MeBaAs associated with AhR activation or GJIC inhibition.},

note = {Place: United States},

keywords = {10-Dimethyl-1, 2-benzanthracene/chemistry/metabolism/toxicity, 9, Animals, Apoptosis/drug effects, Benz(a)Anthracenes/chemistry/metabolism/*toxicity, Carcinoma, Cell Line, Cell Proliferation/drug effects, Cytochrome P-450 Enzyme System/genetics/metabolism, DNA Adducts/analysis/metabolism, DNA/drug effects/metabolism, Dose-Response Relationship, Drug, Enzyme Induction, Enzymologic/drug effects, Gap Junctions/drug effects, Gene Expression Regulation, Genes, Hepatocellular, Hepatocytes/*drug effects/metabolism/pathology, Inbred F344, Liver Neoplasms, Messenger/metabolism, Methylation, Rats, Reporter/drug effects, RNA, Stem Cells/*drug effects/metabolism/pathology, Tumor},

pubstate = {published},

tppubtype = {article}

}

@article{machala_toxicity_2004,

title = {Toxicity of hydroxylated and quinoid PCB metabolites: inhibition of gap junctional intercellular communication and activation of aryl hydrocarbon and estrogen receptors in hepatic and mammary cells.},

author = {Miroslav Machala and Ludek Bláha and Hans-Joachim Lehmler and Martina Plísková and Zuzana Májková and Petra Kapplová and Iva Sovadinová and Jan Vondrácek and Tina Malmberg and Larry W. Robertson},

doi = {10.1021/tx030034v},

issn = {0893-228X},

year  = {2004},

date = {2004-03-01},

journal = {Chemical research in toxicology},

volume = {17},

number = {3},

pages = {340–347},

abstract = {In the present study, a series of 32 hydroxy- and dihydroxy-polychlorinated biphenyls (OH-PCBs) and PCB-derived quinones were prepared and evaluated for their in vitro potencies to downregulate gap junctional intercellular communication (GJIC) and to activate the aryl hydrocarbon receptor (AhR) and the estrogen receptor alpha (ER) in well-established liver and mammary cell models. The rat liver epithelial cell line WB-F344 was used for in vitro determination of GJIC inhibition; the AhR-inducing activity was determined in the rat hepatoma H4IIE.Luc cells stably transfected with a luciferase reporter gene; ER-mediated activity was measured in two breast carcinoma cell lines, MVLN and T47D.Luc, stably transfected with luciferase under the control of estrogen responsive element. Acute inhibition of GJIC, potentially associated with tumor promotion, was detected after treatment with all OH-PCBs under study, with the persistent OH-PCBs being the strongest ones. Several compounds were found to significantly induce the AhR-mediated activity, including 4'-OH-PCB 79, a metabolite of PCB 77, and 2-(4'-chloro)- and 2-(3',4'-dichloro)-1,4-benzoquinones and 1,4-hydroquinones. Low molecular weight OH-PCBs, such as 3'-hydroxy, 4'-, and 3',4'-dihydroxy-4-chlorobiphenyl, elicited significant estrogenic activity and potentiated effect of 17beta-estradiol. Antiestrogenic potencies, determined in the presence of 17beta-estradiol, were found for persistent 4-OH-PCB 187, 4-OH-PCB 146, and some low chlorinated PCB derivatives. However, no apparent association between induction of AhR activity and antiestrogenicity was observed. The majority of the OH-PCBs suppressed the 17beta-estradiol response only at cytotoxic concentrations. Spearman's rank correlations were calculated for these biological data and the physicochemical descriptors, hydrophobicity (log P), molar volume, pKa, log D, and dihedral angle. Significant correlations were found between potency to downregulate GJIC and log P and molar volume (R = -0.7, p < 0.0001). Antiestrogenic effects were also negatively correlated with hydrophobicity and molar volume. No significant correlations among other biological end points and the physicochemical descriptors were observed for the entire set of compounds. These results show that oxygenated PCB metabolites are capable of multiple adverse effects, including gap junction inhibition, AhR-mediated activity, and (anti)estrogenicity. The inhibition of GJIC by OH-PCBs represents a novel mode of action of both the lower chlorinated and the persisting high molecular weight OH-PCBs.},

note = {Place: United States},

keywords = {Adenocarcinoma/metabolism/pathology, Animals, Aryl Hydrocarbon/*biosynthesis, Breast Neoplasms/metabolism/pathology, Carcinoma, Cell Line, Cell Survival/drug effects, Dose-Response Relationship, Down-Regulation, Drug, Environmental Pollutants/*toxicity, Epithelial Cells/drug effects/metabolism, Estrogen/*biosynthesis, Gap Junctions/*drug effects/metabolism, Hepatocellular/metabolism/pathology, Humans, Hydroquinones, Hydroxylation, Liver Neoplasms/metabolism/pathology, Neoplasms/*metabolism/pathology, Polychlorinated Biphenyls/*toxicity, Quinones/*toxicity, Rats, Receptors, Tumor},

pubstate = {published},

tppubtype = {article}

}